我国烟草青枯劳尔氏菌遗传多样性和致病力分析
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摘要
由青枯劳尔氏菌引起的青枯病是我国烟草最严重的土传病害。2012~2014年间,从我国四个主产烟区分离获得89个烟草青枯菌菌株,并对其进行了遗传多样性和致病力分析。根据内切葡聚糖酶(egl)基因序列,我国烟草青枯菌为演化型I(亚洲分支),并可划分为7个序列变种(13、14、15、17、34、44和54)。其中,序列变种15、17、34和44已有报道;序列变种13和14在本研究中首次报道可以侵染烟草。同时,也发现了一个新的序列变种54。不同区域的烟草青枯菌表现出不同的遗传多样性水平:地理分布越往北,烟草青枯菌的遗传多样性越低。通过人工接种三个不同抗性的烟草品种测定了27个代表性菌株的致病力。基于病害流行下曲线面积(AUDPC),聚类分析可将27个菌株划分为高、中、低三种致病型。序列变种和致病型间不存在明显的相关性。
Bacterial wilt caused by Ralstonia solanacearum is the most serious soil-borne disease of tobacco(Nicotiana tabacum) in China. In this study, 89 strains were collected in 2012 to 2014 from across the four major tobacco-growing areas in China. The strains were identified as phylotype I by multiplex PCR and further divided into seven sequevars based on polymorphisms in the egl gene. Among the seven sequevars, four(15, 17, 34 and 44) have been previously described as pathogens of tobacco, and two(13 and 14), which are reported here on tobacco, were previously found only on other plants. As well, a new sequevar named 54 was identified. Strains from tobacco from different regions showed different levels of genetic diversity based on partial egl gene sequences. The farther north the distribution, the lower the gene diversity found.Pathogenicity of 27 representative strains was assessed by inoculation onto three tobacco cultivars of varying susceptibility. Through cluster analysis of AUDPC values, the 27 strains were classified into different pathotypes based on virulence, but no obvious associations were found between sequevar and pathotype. These results will assist in determining geographical distribution of strains, and provide the foundation for breeding and integrated management programs in China.
引文
[1]Liu Y X,Shi J X,Feng Y G,et al.Tobacco bacterial wilt can be biologically controlled by the application of antagonistic strains in combination with organic fertilizer.Biol.Fert.Soils.2013,49:447-464.
    [2]Denny T.Plant pathogenic Ralstonia species.In:Plant-associated bacteria.Samuel S.Gnanamanickam,editor:Springer Netherlands;2006:573-644.
    [3]Grimault V,Anais G,Prior P.Distribution of Pseudomonas solanacearum in the stem tissues of tomato plants with different levels of resistance to bacterial wilt.Plant Pathology.1994,43:663-668.
    [4]Remenant B,de Cambiaire J-C,Cellier G,et al.Ralstonia syzygii,the Blood Disease Bacterium and some Asian R.solanacearum strains form a single genomic species despite divergent lifestyles.PLo S One.2011,6(9):e24356.doi:10.1371/journal.pone.0024356.
    [5]Fegan M,Prior P.How complex is the“Ralstonia solanacearum Species Complex”In:Bacterial Wilt Disease and the Ralstonia solanacearum Species Complex.Allen C,Prior P,Hayward A C,editor:American Phytopathological Society,St.Paul,MN.2005:449-461.
    [6]Villa J E,Tsuchiya K,Horita M,et al.Phylogenetic relationships of Ralstonia solanacearum species complex strains from Asia and other continents based on 16S r DNA,endoglucanase,and hrp B gene sequences.J.Gen.Plant Pathol.2005,71:39-46.
    [7]Seal S E,Jackson L A,Young J P W,et al.Differentiation of Pseudomonas solanacearum,Pseudomonas syzygii,Pseudomonas pickettii and the blood disease bacterium by partial 16S r RNA sequencing:construction of oligonucleotide primers for sensitive detection by polymerase chain reaction.J.Gen.Microbiol.1993,139:1587-1594.
    [8]Seal S E,Taghavi M,Fegan N,et al.Determination of Ralstonia(Pseudomonas)solanacearum r DNA subgroups by PCR tests.Plant Pathol.1999,48:115-120.
    [9]Weller S A,Elphinstone J G,Smith N G,et al.Detection of Ralstonia solanacearum strains with a quantitative,multiplex,real-time,fluorogenic PCR(Taq Man)assay.Appl.Environ.Microbiol.2000,66:2853-2858.
    [10]Gillings M,Fahy P,Davies C.Restriction analysis of an amplified polygalacturonase gene fragment differentiates strains of the phytopathogenic bacterium Pseudomonas solanacearum.Lett Appl Microbiol.1993,17:44-48.
    [11]Poussier S,Prior P,Luisetti J,et al.Partial sequencing of the hrp B and endoglucanase genes confirms and expands the known diversity within the Ralstonia solanacearum species complex.Syst.Appl.Microbiol.2000,23:479-486.
    [12]Schonfeld J,Heuer H,van Elsas J D,et al.Specific and sensitive detection of Ralstonia solanacearum in soil on the basis of PCR amplification of flic fragments.Appl.Environ.Microbiol.2003,69:7248-7256.
    [13]Wicker E,Lefeuvre P,de Cambiaire JC,et al.Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA.ISME J.2012,6:961-974.
    [14]Xu J,Pan Z C,Prior P,et al.Genetic diversity of Ralstonia solanacearum strains from China.Eur.J.Plant Pathol.2009,125:641-653.
    [15]Lewis Ivey M L,Mc Spadden Gardner B B,Opina N,et al.Diversity of Ralstonia solanacearum infecting eggplant in the Philippines.Phytopathology 2007,97:1467-1475.
    [16]Sanchez P A,Mejia L,Fegan M,et al.Diversity and distribution of Ralstonia solanacearum strains in Guatemala and rare occurrence of tomato fruit infection.Plant Pathol.2008,57:320-331.
    [17]方树民,顾钢,纪成灿,等.烟草青枯菌致病型及分布的研究[J].2002,8(3):40-43.
    [18]潘哲超,徐进,顾钢,等.福建及贵州等地烟草青枯菌系统发育分析[J].植物保护,2012,38(1):18-23.
    [19]徐进,顾钢,潘哲超,等.福建烟草青枯菌演化型及生化变种鉴定研究[J].中国烟草学报,2010,16(6):66-71.
    [20]Hayward A C.Characteristics of Pseudomonas solanacearum.J.Appl.Bacteriol.1964,27:265-277.
    [21]Jukes T H,Cantor C R.Evolution of protein molecules.In:Mammalian Protein Metabolism.Munro H N,editor:Academic Press,New York.1969:121-132.
    [22]Fegan M,Prior P.Diverse members of the Ralstonia solanacearum species complex cause bacterial wilts of banana.Australas.Plant Path.2006,35:93-101.
    [23]Wicker E,Grassart L,Coranson-Beaudu R,et al.Ralstonia solanacearum strains from Martinique(French West Indies)exhibiting a new pathogenic potential.Appl.Environ.Microbiol.2007,73:6790-6801.
    [24]方树民,纪成灿,顾钢,等.烟草青枯病菌生理分化的研究[J].中国烟草学报,1998,4(1):38-43.
    [25]顾钢,纪成灿,方树民,等.烟草主栽品种对青枯病抗性反应[J].云南农业大学学报,2002,17(2):130-136.
    [26]Das M K,Rajaram S,Mundt C C,et al.Inheritance of slow-rusting resistance to leaf rust in wheat.Crop Science.1992,32:1452-1456.
    [27]Simko I,Piepho H-P.The Area under the disease progress stairs:Calculation,Advantage,and Application.Phytopathology,2012,102:381-389.
    [28]Xue Q Y,Yin Y N,Yang W,et al.Genetic diversityof Ralstonia solanacearum strains from China assessed by PCR-based fingerprints to unravel host plant-and site-dependent distribution patterns.FEMS.Microbiol.Ecol.2011.75:507-519.
    [29]Genin S,Boucher C.Ralstonia solanacearum:secrets of a major pathogen unveiled by analysis of its genome.Mol.Plant Pathol.2002,3:111-118.
    [30]Hong J C,Norman D J,Reed D L,et al.Diversity among Ralstonia solanacearum strains isolated from the southeastern United States.Phytopathology.2012,102:924-936.
    [31]Horita M,Tsuchiya K.Genetic diversity of Japanese strains of Ralstonia solanacearum.Phytopathology.2001,91:399-407.
    [32]Jeong Y,Kim J,Kang Y,et al.Genetic diversity and distribution of Korean isolates of Ralstonia solanacearum.Plant Dis.2007,91:1277-1287.
    [33]Prior P,Fegan M.Recent development in the phylogeny and classification of Ralstonia solanacearum.Acta Hortic.2005,695:127-136.
    [34]Ramesh R,Achari G A,Gaitonde S.Genetic diversity of Ralstonia solanacearum infecting solanaceous vegetables from India reveals the existence of unknown or newer sequevars of Phylotype I strains.Eur J Plant Pathol.2014,140(3):543-562.
    [35]Sagar V,Jeevalatha A,Mian S,et al.Potato bacterial wilt in India caused by strains of phylotype I,II and IV of Ralstonia solanacearum.Eur J Plant Pathol.2014,138(1):51-65.
    [36]Huerta AI,Milling A,Allen C.Tropical strains of Ralstonia solanacearum outcompete race 3biovar 2 strains at lowland tropical temperatures.Appl Environ Microbiol 2015,81:3542–3551.doi:10.1128/AEM.04123-14.
    [37]Zheng X F,Zhu Y J,Liu B,et al.Relationship between Ralstonia solanacearum diversity and severity of bacterial wilt disease in tomato fields in China.J Phytopathol.2014,162:607-616.
    [38]Ramsubhag A,Lawrence D,Cassie D,et al.Wide genetic diversity of Ralstonia solanacearum strains affecting tomato in Trinidad,West Indies.Plant Pathol.2012,61:844-857.
    [39]Suga Y,Horita M,Umekita M,et al.Pathogenic characters of Japanese potato strains of Ralstonia solanacearum.J Gen Plant Pathol.2013,79:110-114.
    [40]Jaunet T X,Wang J F.Variation in genotype and aggressiveness diversity of Ralstonia solanacearum race 1 isolated from tomato in Taiwan.Phytopathology.1999,89:320-327.
    [41]Liu Y Q,Kanda A,Yano K,et al.Molecular typing of Japanese strains of Ralstonia solanacearum in relation to the ability to induce a hypersensitive reaction in tobacco.J Gen Plant Pathol.2009,75:369-380.
    [42]Peeters N,Carrère S,Anisimova M,et al.Repertoire,unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex.BMC Genomics.2013,doi:10.1186/1471-2164-14-859.